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Analysis of Biological Networks (BE.440), Fall 2004
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This class analyzes complex biological processes from the molecular, cellular, extracellular, and organ levels of hierarchy. Emphasis is placed on the basic biochemical and biophysical principles that govern these processes. Examples of processes to be studied include chemotaxis, the fixation of nitrogen into organic biological molecules, growth factor and hormone mediated signaling cascades, and signaling cascades leading to cell death in response to DNA damage. In each case, the availability of a resource, or the presence of a stimulus, results in some biochemical pathways being turned on while others are turned off. The course examines the dynamic aspects of these processes and details how biochemical mechanistic themes impinge on molecular/cellular/tissue/organ-level functions. Chemical and quantitative views of the interplay of multiple pathways as biological networks are emphasized. Student work will culminate in the preparation of a unique grant application in an area of biological networks.

Subject:
Biology
Chemistry
Life Science
Physical Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Essigmann, John
Sasisekharan, Ram
Date Added:
01/01/2004
Anatomy and Physiology
Unrestricted Use
CC BY
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Anatomy and Physiology is a dynamic textbook for the two-semester human anatomy and physiology course for life science and allied health majors. The book is organized by body system and covers standard scope and sequence requirements. Its lucid text, strategically constructed art, career features, and links to external learning tools address the critical teaching and learning challenges in the course. The web-based version of Anatomy and Physiology also features links to surgical videos, histology, and interactive diagrams.

Subject:
Anatomy/Physiology
Life Science
Material Type:
Textbook
Provider:
Rice University
Provider Set:
OpenStax College
Author:
Brandon Poe
Dean H. Kruse
Eddie Johnson
J. Gordon Betts
James A. Wise
Jody E. Johnson
Kelly A. Young
Mark Womble
Oksana Korol
Peter DeSaix
Date Added:
03/06/2013
BIOL_150
Unrestricted Use
CC BY
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Subject:
Biology
Material Type:
Module
Author:
Christine Crefton
Date Added:
02/24/2020
Bio Inspired Design
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CC BY-NC-SA
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The course Bio-Inspired Design gives an overview of non-conventional mechanical approaches in nature and shows how this knowledge can lead to more creativity in mechanical design and to better (simpler, smaller, more robust) solutions than with conventional technology. The course discusses a large number of biological organisms with smart constructions, unusual mechanisms or clever sensing and processing methods and presents a number of technical examples and designs of bio-inspired instruments and machines.

Subject:
Applied Science
Architecture and Design
Material Type:
Homework/Assignment
Lecture Notes
Reading
Provider:
Delft University of Technology
Provider Set:
Delft University OpenCourseWare
Author:
Dr.ir. P. Breedveld
Date Added:
05/22/2019
Biofundamentals 2.0
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CC BY-SA
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Our goal is to present the key observations and unifying concepts upon which modern biology is based; it is not a survey of all biology! Once understood, these foundational observations and concepts should enable you to approach any biological process, from disease to kindness, from a scientific perspective. To understand biological systems we need to consider them from two complementary perspectives; how they came to be (the historic, that is, evolutionary) and how their structures, traits, and behaviors are produced (the mechanistic, that is, the physicochemical)

Subject:
Biology
Life Science
Material Type:
Textbook
Provider:
University of Colorado Boulder
Provider Set:
Virtual Laboratories
Author:
Melanie M. Cooper
Michael W. Klymkowski
Date Added:
06/27/2016
Biological Computing: At the Crossroads of Engineering and Science, Spring 2005
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CC BY-NC-SA
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Imagine you are a salesman needing to visit 100 cities connected by a set of roads. Can you do it while stopping in each city only once? Even a supercomputer working at 1 trillion operations per second would take longer than the age of the universe to find a solution when considering each possibility in turn. In 1994, Leonard Adleman published a paper in which he described a solution, using the tools of molecular biology, for a smaller 7-city example of this problem. His paper generated enormous scientific and public interest, and kick-started the field of Biological Computing, the main subject of this discussion based seminar course. Students will analyze the Adleman paper, and the papers that preceded and followed it, with an eye for identifying the engineering and scientific aspects of each paper, emphasizing the interplay of these two approaches in the field of Biological Computing. This course is appropriate for both biology and non-biology majors. Care will be taken to fill in any knowledge gaps for both scientists and engineers.

Subject:
Biology
Life Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Khodor, Julia
Date Added:
01/01/2005
Biological Engineering II: Instrumentation and Measurement, Fall 2006
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CC BY-NC-SA
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This course covers sensing and measurement for quantitative molecular/cell/tissue analysis, in terms of genetic, biochemical, and biophysical properties. Methods include light and fluorescence microscopies; electro-mechanical probes such as atomic force microscopy, laser and magnetic traps, and MEMS devices; and the application of statistics, probability and noise analysis to experimental data.

Subject:
Biology
Electronic Technology
Life Science
Mathematics
Professional Studies
Statistics and Probability
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
So, Peter
Date Added:
01/01/2006
Biological Oceanography, Fall 2008
Only Sharing Permitted
CC BY-NC-ND
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This graduate course will introduce students to the processes controlling phytoplankton, zooplankton, heterotrophic bacterial and benthic infaunal growth and abundance. We'll do a broad-scale survey of patterns of productivity and abundance in the coastal zones, upwelling centers, gyres, and the deep sea. We'll briefly survey ecosystem simulation models, especially those applicable to the Gulf of Maine. Readings will be from the primary literature and a few book chapters. The effects of anthropogenic effects on marine communities will be stressed throughout. Calculus will be used throughout the course, but there is no formal calculus requirement.

Subject:
Oceanography
Physical Science
Material Type:
Full Course
Provider:
UMass Boston
Provider Set:
UMass Boston OpenCourseWare
Author:
Eugene Gallagher
Date Added:
05/23/2019
Biology
Unrestricted Use
CC BY
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Biology is designed to cover the scope and sequence requirements of a typical two-semester biology course for science majors. The text provides comprehensive coverage of foundational research and core biology concepts through an evolutionary lens. Biology includes rich features that engage students in scientific inquiry, highlight careers in the biological sciences, and offer everyday applications. The book also includes clicker questions to help students understand—and apply—key concepts.

Subject:
Biology
Life Science
Material Type:
Textbook
Provider:
Rice University
Provider Set:
OpenStax College
Author:
Connie Rye
Jean DeSaix
Jung Choi
Robert Wise
Vladimir Jurukovski
Date Added:
08/22/2012
Biology 101A Lab Packet
Unrestricted Use
CC BY
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Lab Manual for BIO101 at Mt Hood Community College. The associated textbook is available at https://openoregon.pressbooks.pub/mhccbiology101/

Subject:
Biology
Life Science
Material Type:
Activity/Lab
Provider:
OpenOregon
Author:
Christine Anderson
Lisa Bartee
Date Added:
05/22/2019
Biology: Genetics
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Educational Use
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College-level course focusing on the principles of genetics. Course topics include structure and function of genes, chromosomes and genomes, biological variation, population genetics, use of genetic methods to analyze protein function, gene regulation, and inherited disease. Course features include lecture notes, assignments and solutions, and exams and solutions.

Subject:
Applied Science
Biology
Genetics
Life Science
Material Type:
Activity/Lab
Assessment
Diagram/Illustration
Full Course
Homework/Assignment
Lecture Notes
Student Guide
Syllabus
Provider:
Massachusetts Institute of Technology
Provider Set:
OpenCourseWare
Author:
Fink, Gerald
Kaiser, Chris
Mischke, Michelle
Samson, Leona
Date Added:
01/01/2004
Biology I
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An introduction to biology intended for non-science majors.  Focus areas include chemical foundations, cell structure and division, genetics, and evolution.

Subject:
Biology
Life Science
Material Type:
Full Course
Textbook
Provider:
Lumen Learning
Provider Set:
Candela Courseware
Author:
David Fernandez
Leslie Orzetti
Paula Rodgers
Date Added:
05/22/2019
Biology I Course Content
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CC BY-NC
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The Biology I Course was developed through the Ohio Department of Higher Education OER Innovation Grant. The course is part of the Ohio Transfer Assurance Guides and is also named OSC003. This work was completed and the course was posted in October 2019. For more information about credit transfer between Ohio colleges and universities, please visit: www.ohiohighered.org/transfer.Team LeadCathy Sistilli                                         Eastern Gateway Community CollegeContent ContributorsLisa Aschemeier                                 Northwest State Community CollegeShaun Blevins                                     Rhodes State CollegeRachel Detraz                                     Edison State Community College                                     Sara Finch                                          Sinclair Community CollegeWendy Gagliano                                 Clark State Community College AJ Snow                                             University of Akron Wayne CollegeLibrarianAmanda Rinehart                               Ohio State UniversityReview TeamJessica Hall                                        Ohio Dominican UniversitySanhita Gupta                                    Kent State UniversityErica Mersfelder                                 Sinclair Community College

Subject:
Biology
Life Science
Material Type:
Full Course
Provider:
Ohio Open Ed Collaborative
Date Added:
05/11/2021
Biology II
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This template course was developed from generally available open educational resources (OER) in use at multiple institutions, drawing mostly from a primary work published by OpenStax College Concepts of Biology, but also including additional open works from various sources as noted in attributions on each page of materials.

Subject:
Biology
Life Science
Material Type:
Full Course
Textbook
Provider:
Lumen Learning
Provider Set:
Candela Courseware
Date Added:
05/22/2019
Biology II Course Content
Conditional Remix & Share Permitted
CC BY-NC
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The Biology II Course was developed through the Ohio Department of Higher Education OER Innovation Grant. The course is part of the Ohio Transfer Assurance Guides and is also named OSC004. This work was completed and the course was posted in October 2019. For more information about credit transfer between Ohio colleges and universities, please visit: www.ohiohighered.org/transfer.Team LeadCathy Sistilli                                         Eastern Gateway Community CollegeContent ContributorsLisa Aschemeier                                 Northwest State Community CollegeShaun Blevins                                     Rhodes State CollegeRachel Detraz                                     Edison State Community College                                     Sara Finch                                          Sinclair Community CollegeWendy Gagliano                                 Clark State Community College AJ Snow                                             University of Akron Wayne CollegeLibrarianAmanda Rinehart                               Ohio State UniversityReview TeamJessica Hall                                        Ohio Dominican UniversitySanhita Gupta                                    Kent State UniversityErica Mersfelder                                 Sinclair Community College

Subject:
Biology
Life Science
Material Type:
Full Course
Provider:
Ohio Open Ed Collaborative
Date Added:
07/26/2021
Biology: Introductory Biology
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Educational Use
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College-level introductory biology course focusing on the application of the fundamental principles of human biology. Course topics include genetics, cell biology, molecular biology, disease (infectious agents, inherited diseases and cancer), developmental biology, neurobiology, and evolution. Course features include video lectures, audio lectures, subtitles/transcripts, lecture notes, assignments and solutions, and exams and solutions.

Subject:
Applied Science
Biology
Genetics
Life Science
Material Type:
Assessment
Diagram/Illustration
Full Course
Homework/Assignment
Lesson Plan
Reading
Syllabus
Provider:
Massachusetts Institute of Technology
Provider Set:
OpenCourseWare
Author:
Diviya Sinha
Hazel Sive
Tyler Jacks
Date Added:
01/01/2013
Biology OER
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CC BY-SA
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Assorted biology-related OER including biomedical science, biology and forensic science. OER in multiple formats including video, animations and downloadable text.

Subject:
Biology
Life Science
Material Type:
Activity/Lab
Assessment
Case Study
Diagram/Illustration
Lecture
Provider:
De Montfort University
Author:
Vivien Rolfe and others
Date Added:
04/02/2020
Cancer Biology: From Basic Research to the Clinic, Fall 2004
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CC BY-NC-SA
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Seminar covering topics of current interest in biology. Includes reading and analysis of research papers and student presentations. Contact Biology Education Office for topics. This course is one of many Advanced Undergraduate Seminars offered by the Biology Department at MIT. These seminars are tailored for students with an interest in using primary research literature to discuss and learn about current biological research in a highly interactive setting. In 1971, President Nixon declared the "War on Cancer," but after three decades the war is still raging. How much progress have we made toward winning the war and what are we doing to improve the fight? Understanding the molecular and cellular events involved in tumor formation, progression, and metastasis is crucial to the development of innovative therapy for cancer patients. Insights into these processes have been gleaned through basic research using biochemical, molecular, and genetic analyses in yeast, C. elegans, mice, and cell culture models. We will explore the laboratory tools and techniques used to perform cancer research, major discoveries in cancer biology, and the medical implications of these breakthroughs. A focus of the class will be critical analysis of the primary literature to foster understanding of the strengths and limitations of various approaches to cancer research. Special attention will be made to the clinical implications of cancer research performed in model organisms and the prospects for ending the battle with this devastating disease.

Subject:
Biology
Life Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Haigis, Kevin
Kim, Carla
Date Added:
01/01/2004
Cell Biology, Spring 2007
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CC BY-NC-SA
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Biology of cells of higher organisms: structure, function, and biosynthesis of cellular membranes and organelles; cell growth and oncogenic transformation; transport, receptors and cell signaling; the cytoskeleton, the extracellular matrix, and cell movements; chromatin structure and RNA synthesis.

Subject:
Biology
Life Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Orr-Weaver, Terry
Date Added:
01/01/2007