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Analysis of Biological Networks (BE.440), Fall 2004
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This class analyzes complex biological processes from the molecular, cellular, extracellular, and organ levels of hierarchy. Emphasis is placed on the basic biochemical and biophysical principles that govern these processes. Examples of processes to be studied include chemotaxis, the fixation of nitrogen into organic biological molecules, growth factor and hormone mediated signaling cascades, and signaling cascades leading to cell death in response to DNA damage. In each case, the availability of a resource, or the presence of a stimulus, results in some biochemical pathways being turned on while others are turned off. The course examines the dynamic aspects of these processes and details how biochemical mechanistic themes impinge on molecular/cellular/tissue/organ-level functions. Chemical and quantitative views of the interplay of multiple pathways as biological networks are emphasized. Student work will culminate in the preparation of a unique grant application in an area of biological networks.

Subject:
Biology
Chemistry
Life Science
Physical Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Essigmann, John
Sasisekharan, Ram
Date Added:
01/01/2004
Biochemistry Laboratory, Spring 2009
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" The course, which spans two thirds of a semester, provides students with a research-inspired laboratory experience that introduces standard biochemical techniques in the context of investigating a current and exciting research topic, acquired resistance to the cancer drug Gleevec. Techniques include protein expression, purification, and gel analysis, PCR, site-directed mutagenesis, kinase activity assays, and protein structure viewing. This class is part of the new laboratory curriculum in the MIT Department of Chemistry. Undergraduate Research-Inspired Experimental Chemistry Alternatives (URIECA) introduces students to cutting edge research topics in a modular format. Acknowledgments Development of this course was funded through an HHMI Professors grant to Professor Catherine L. Drennan."

Subject:
Chemistry
Physical Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Taylor, Elizabeth Vogel
Date Added:
01/01/2009
Biology: Genetics
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Educational Use
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College-level course focusing on the principles of genetics. Course topics include structure and function of genes, chromosomes and genomes, biological variation, population genetics, use of genetic methods to analyze protein function, gene regulation, and inherited disease. Course features include lecture notes, assignments and solutions, and exams and solutions.

Subject:
Applied Science
Biology
Genetics
Life Science
Material Type:
Activity/Lab
Assessment
Diagram/Illustration
Full Course
Homework/Assignment
Lecture Notes
Student Guide
Syllabus
Provider:
Massachusetts Institute of Technology
Provider Set:
OpenCourseWare
Author:
Fink, Gerald
Kaiser, Chris
Mischke, Michelle
Samson, Leona
Date Added:
01/01/2004
Biology: Introductory Biology
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Educational Use
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College-level introductory biology course focusing on the application of the fundamental principles of human biology. Course topics include genetics, cell biology, molecular biology, disease (infectious agents, inherited diseases and cancer), developmental biology, neurobiology, and evolution. Course features include video lectures, audio lectures, subtitles/transcripts, lecture notes, assignments and solutions, and exams and solutions.

Subject:
Applied Science
Biology
Genetics
Life Science
Material Type:
Assessment
Diagram/Illustration
Full Course
Homework/Assignment
Lesson Plan
Reading
Syllabus
Provider:
Massachusetts Institute of Technology
Provider Set:
OpenCourseWare
Author:
Diviya Sinha
Hazel Sive
Tyler Jacks
Date Added:
01/01/2013
Cell Biology: Structure and Functions of the Nucleus, Spring 2010
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The goal of this course is to teach both the fundamentals of nuclear cell biology as well as the methodological and experimental approaches upon which they are based. Lectures and class discussions will cover the background and fundamental findings in a particular area of nuclear cell biology. The assigned readings will provide concrete examples of the experimental approaches and logic used to establish these findings. Some examples of topics include genome and systems biology, transcription, and gene expression.

Subject:
Biology
Life Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Sharp, Phillip
Young, Richard
Date Added:
01/01/2010
Computational Functional Genomics, Spring 2005
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Study and discussion of computational approaches and algorithms for contemporary problems in functional genomics. Topics include DNA chip design, experimental data normalization, expression data representation standards, proteomics, gene clustering, self-organizing maps, Boolean networks, statistical graph models, Bayesian network models, continuous dynamic models, statistical metrics for model validation, model elaboration, experiment planning, and the computational complexity of functional genomics problems.

Subject:
Applied Science
Biology
Computer Science
Life Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Gifford, David
Jaakkola, Tommi Sakari
Date Added:
01/01/2005
The DNA Damage Response as a Target for Anti-Cancer Therapy, Fall 2008
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Cellular responses to DNA damage constitute one of the most important fields in cancer biology. In this class we will analyze classical and recent papers from the primary research literature to gain a profound understand of cell cycle regulation and DNA damage checkpoints that act as powerful emergency brakes to prevent cancer. This course is one of many Advanced Undergraduate Seminars offered by the Biology Department at MIT. These seminars are tailored for students with an interest in using primary research literature to discuss and learn about current biological research in a highly interactive setting. Many instructors of the Advanced Undergraduate Seminars are postdoctoral scientists with a strong interest in teaching.

Subject:
Biology
Life Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Reinhardt, Hans Christian
Date Added:
01/01/2008
Directed Evolution: Engineering Biocatalysts, Spring 2008
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Enzymes, nature's catalysts, are remarkable biomolecules capable of extraordinary specificity and selectivity. Directed evolution has been used to produce enzymes with many unique properties, including altered substrate specificity, thermal stability, organic solvent resistance, and enantioselectivity--selectivity of one stereoisomer over another. The technique of directed evolution comprises two essential steps: mutagenesis of the gene encoding the enzyme to produce a library of variants, and selection of a particular variant based on its desirable catalytic properties. In this course we will examine what kinds of enzymes are worth evolving and the strategies used for library generation and enzyme selection. We will focus on those enzymes that are used in the synthesis of drugs and in biotechnological applications. This course is one of many Advanced Undergraduate Seminars offered by the Biology Department at MIT. These seminars are tailored for students with an interest in using primary research literature to discuss and learn about current biological research in a highly interactive setting. Many instructors of the Advanced Undergraduate Seminars are postdoctoral scientists with a strong interest in teaching.

Subject:
Biology
Life Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Love, Kerry
Date Added:
01/01/2008
Elements of Mechanical Design, Spring 2009
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CC BY-NC-SA
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" This is an advanced course on modeling, design, integration and best practices for use of machine elements such as bearings, springs, gears, cams and mechanisms. Modeling and analysis of these elements is based upon extensive application of physics, mathematics and core mechanical engineering principles (solid mechanics, fluid mechanics, manufacturing, estimation, computer simulation, etc.). These principles are reinforced via (1) hands-on laboratory experiences wherein students conduct experiments and disassemble machines and (2) a substantial design project wherein students model, design, fabricate and characterize a mechanical system that is relevant to a real world application. Students master the materials via problems sets that are directly related to, and coordinated with, the deliverables of their project. Student assessment is based upon mastery of the course materials and the student's ability to synthesize, model and fabricate a mechanical device subject to engineering constraints (e.g. cost and time/schedule)."

Subject:
Chemistry
Engineering
Genetics
Life Science
Manufacturing
Physical Science
Professional Studies
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Culpepper, Martin
Date Added:
01/01/2009
Foundations of Computational and Systems Biology, Spring 2014
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This course is an introduction to computational biology emphasizing the fundamentals of nucleic acid and protein sequence and structural analysis; it also includes an introduction to the analysis of complex biological systems. Topics covered in the course include principles and methods used for sequence alignment, motif finding, structural modeling, structure prediction and network modeling, as well as currently emerging research areas.

Subject:
Biology
Life Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Burge, Christopher
Fraenkel, Ernest
Gifford, David
Date Added:
01/01/2014
The Fountain of Life: From Dolly to Customized Embryonic Stem Cells, Fall 2007
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" During development, the genetic content of each cell remains, with a few exceptions, identical to that of the zygote. Most differentiated cells therefore retain all of the genetic information necessary to generate an entire organism. It was through pioneering technology of somatic cell nuclear transfer (SCNT) that this concept was experimentally proven. Only 10 years ago the sheep Dolly was the first mammal to be cloned from an adult organism, demonstrating that the differentiated state of a mammalian cell can be fully reversible to a pluripotent embryonic state. A key conclusion from these experiments was that the difference between pluripotent cells such as embryonic stem (ES) cells and unipotent differentiated cells is solely a consequence of reversible changes. These changes, which have proved to involve reversible alterations to both DNA and to proteins that bind DNA, are known as epigenetic, to distinguish them from genetic alterations to DNA sequence. In this course we will explore such epigenetic changes and study different approaches that can return a differentiated cell to an embryonic state in a process referred to as epigenetic reprogramming, which will ultimately allow generation of patient-specific stem cells and application to regenerative therapy. This course is one of many Advanced Undergraduate Seminars offered by the Biology Department at MIT. These seminars are tailored for students with an interest in using primary research literature to discuss and learn about current biological research in a highly interactive setting. Many instructors of the Advanced Undergraduate Seminars are postdoctoral scientists with a strong interest in teaching."

Subject:
Biology
Genetics
Life Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Meissner, Alexander
Date Added:
01/01/2007
Freshman Seminar: Structural Basis of Genetic Material: Nucleic Acids, Fall 2005
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Since the discovery of the structure of the DNA double helix in 1953 by Watson and Crick, the information on detailed molecular structures of DNA and RNA, namely, the foundation of genetic material, has expanded rapidly. This discovery is the beginning of the "Big Bang" of molecular biology and biotechnology. In this seminar, students discuss, from a historical perspective and current developments, the importance of pursuing the detailed structural basis of genetic materials.

Subject:
Biology
Genetics
Life Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Zhang, Shuguang
Date Added:
01/01/2005
Innovation in Military Organizations, Fall 2005
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" This seminar has three purposes. One, it inquires into the causes of military innovation by examining a number of the most outstanding historical cases. Two, it views military innovations through the lens of organization theory to develop generalizations about the innovation process within militaries. Three, it uses the empirical study of military innovations as a way to examine the strength and credibility of hypotheses that organization theorists have generated about innovation in non-military organizations."

Subject:
Political Science
Social Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Posen, Barry
Sapolsky, Harvey
Date Added:
01/01/2005
Introduction to Biological Engineering Design, Spring 2009
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" This class is a project-based introduction to the engineering of synthetic biological systems. Throughout the term, students develop projects that are responsive to real-world problems of their choosing, and whose solutions depend on biological technologies. Lectures, discussions, and studio exercises will introduce (1) components and control of prokaryotic and eukaryotic behavior, (2) DNA synthesis, standards, and abstraction in biological engineering, and (3) issues of human practice, including biological safety; security; ownership, sharing, and innovation; and ethics. Enrollment preference is given to freshmen. This subject was originally developed and first taught in Spring 2008 by Drew Endy and Natalie Kuldell. Many of Drew's materials are used in this Spring 2009 version, and are included with his permission. This OCW Web site is based on the OpenWetWare class Wiki, found at OpenWetWare: 20.020 (S09)"

Subject:
Biology
Chemistry
Genetics
Life Science
Physical Science
Material Type:
Full Course
Provider:
M.I.T.
Provider Set:
M.I.T. OpenCourseWare
Author:
Kuldell, Natalie
Date Added:
01/01/2009
Introduction to Psychology Course Content
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The Introduction to Psychology course was developed through the Ohio Department of Higher Education OER Innovation Grant. This work was completed and the course was posted in September 2018. The course is part of the Ohio Transfer Module and is also named OSS015. For more information about credit transfer between Ohio colleges and universities please visit: www.ohiohighered.org/transfer.Team LeadVincent Granito                                    Lorain County Community CollegeContent ContributorsNicole Brandt                                       Columbus State Community CollegeLynne Gabriel                                      Lakeland Community CollegeJackie Sample                                     Central Ohio Technical CollegeLibrarianRachel Dilley                                       Columbus State Community CollegeReview TeamMelissa Beers                                      Ohio State UniversityBryan Gerber                                        Stark State College

Subject:
Psychology
Social Science
Material Type:
Full Course
Provider:
Ohio Open Ed Collaborative
Date Added:
05/07/2021
Introduction to Psychology Course Content, Nature/Nurture (Genetics & Evolution), Nature/Nurture (Genetics & Evolution) - Course Map and Recommended Resources
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CC BY-NC
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 How to Use this GuideThis guide provides information and resources on teaching learning concepts in an Introduction to Psychology course. All resources are Open Access and can be downloaded or added to a Course Management System (LMS) via the hyperlinks.Although nature/nurture is not specifically addressed as a topic that falls under a Pillar, according to the TAG, these concepts can be applied across a number of required topics, such as Brain and Behavior, Lifespan Development, and Intelligence.   IntroductionThis section introduces students to the concepts of nature and nurture, and provides examples of psychological topics in which an understanding of the impact of both nature and nurture is crucial.  

Subject:
Psychology
Material Type:
Module
Author:
OER Librarian
Date Added:
05/07/2021
Language & Life Sciences: Controversial Issues in Gene Research
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One of the fastest-growing areas of medical research is that of genetic testing and gene therapy. This chapter introduces students to this area of DNA research and helps them explore the related ethical issues. Scientists have recently completed a preliminary ‰ŰĎmap‰Ű of all the genes in the human body. This is also known as the Human Genome Project and consists of all the sequences of DNA chemical units that tell a cell how to behave. This accomplishment has incredible benefits. However, it also raises new, complex issues that society cannot ignore.

Subject:
English as a Second Language
Material Type:
Lesson Plan
Teaching/Learning Strategy
Provider:
U.S. Department of State, Bureau of Educational and Cultural Affairs
Author:
Donna M. Brinton, Christine Holten, Jodi L. Nooyen
Date Added:
04/03/2020
Language & Life Sciences: Mapping the Human Genome
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Rather than focus on the scientific details of this discovery, this chapter gives an overview of the important concepts related to DNA's initial discovery and later research conducted in this field. Teachers can use the lesson plans and materials to help students understand these fundamental concepts and gain a command of the vocabulary necessary to discuss them. Given the amazing advances in biological research and the new knowledge that has become available to human beings about their own biological makeup, it is important for students to know basic concepts related to DNA research and the human genome project. This following lesson provides a basic introduction to this topic in an interactive fashion.

Subject:
Biology
English as a Second Language
Life Science
Material Type:
Lesson Plan
Teaching/Learning Strategy
Provider:
U.S. Department of State, Bureau of Educational and Cultural Affairs
Author:
Donna M. Brinton, Christine Holten, Jodi L. Nooyen
Date Added:
04/03/2020
Language & Life Sciences: eJournals
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Biotechnology is perhaps the most rapidly advancing area in science today. The Advances in Biotechnology volume has been created to provide language teachers with resources about breakthroughs in biotechnology. Each chapter of the volume highlights one aspect of research in the field of DNA and genetics along with its applications to and implications for society. The chapters feature relevant background information on each topic, interactive and communicative classroom activities, and a list of related print and Internet resources that will allow teachers to expand the lesson further.

Subject:
English as a Second Language
Genetics
Life Science
Material Type:
Activity/Lab
Lesson Plan
Reading
Teaching/Learning Strategy
Provider:
U.S. Department of State, Bureau of Educational and Cultural Affairs
Author:
Donna M. Brinton, Christine Holten, Jodi L. Nooyen
Date Added:
04/03/2020